% SPDX-License-Identifier: Apache-2.0 (database-page)= # Database ## Overview The EOS database system provides a flexible, pluggable persistence layer for time-series data records with automatic lazy loading, dirty tracking, and multi-backend support. The architecture separates the abstract database interface from concrete storage implementations, allowing seamless switching between LMDB and SQLite backends. ## Architecture ### Three-Layer Design **Abstract Interface Layer** (`DatabaseABC`) - Defines the contract for all database operations - Provides compression/decompression utilities - Backend-agnostic API **Backend Implementation Layer** (`DatabaseBackendABC`) - Concrete implementations: `LMDBDatabase`, `SQLiteDatabase` - Singleton pattern ensures single instance per backend - Thread-safe operations via internal locking **Record Protocol Layer** (`DatabaseRecordProtocolMixin`) - Manages in-memory record lifecycle - Implements lazy loading strategies - Handles dirty tracking and autosave ## Configuration ### Database Settings (`DatabaseCommonSettings`) ```python provider: Optional[str] = None # "LMDB" or "SQLite" compression_level: int = 9 # 0-9, gzip compression initial_load_window_h: Optional[int] = None # Hours, None = full load keep_duration_h: Optional[int] = None # Retention period autosave_interval_sec: Optional[int] = None # Auto-flush interval compaction_interval_sec: Optional[int] = 604800 # Compaction interval batch_size: int = 100 # Batch operation size ``` ### User Configuration Guide This section explains what each setting does in practical terms and gives concrete recommendations for common deployment scenarios. #### `provider` — choosing a backend Set `provider` to `"LMDB"` or `"SQLite"`. Leave it `None` only during development or unit testing — with `None` set, nothing is persisted to disk and all data is lost on restart. **Use LMDB** for a long-running home server that records data continuously. It is significantly faster for high-frequency writes and range reads because it uses memory-mapped files. The trade-off is that it pre-allocates a large file on disk (default 10 GB) even when mostly empty. **Use SQLite** when disk space is constrained, for portable single-file deployments, or when you want to inspect or manipulate the database with standard SQL tools. SQLite is slightly slower for bulk writes but perfectly adequate for home energy data volumes. **Do not** switch backends while data exists in the old backend — records are not migrated automatically. If you need to switch, vacuum the old database first, export your data, then reconfigure. #### `compression_level` — storage size vs. CPU Values range from `0` (no compression) to `9` (maximum compression). The default of `9` is appropriate for most deployments: home energy time-series data compresses very well (often 60–80 % reduction) and the CPU overhead is negligible on modern hardware. **Set to `0`** only if you are running on very constrained hardware (e.g. a single-core ARM board at full load) and storage space is not a concern. **Do not** change this setting after data has been written — the database stores each record with the compression level active at write time and auto-detects the format on read, so mixed levels are fine technically, but you will not reclaim space from already-written records until they are rewritten by compaction. #### `initial_load_window_h` — startup memory usage Controls how much history is loaded into memory when the application first accesses a namespace. **Set a window** (e.g. `48`) on systems with limited RAM or large databases. Only the most recent 48 hours are loaded immediately; older data is fetched on demand if a query reaches outside that window. **Leave as `None`** (the default) on well-resourced systems or when you need guaranteed access to all history from the first query. Full load is simpler and avoids the small latency spike of incremental loads. **Do not** set this to a very small value (e.g. `1`) if your forecasting or reporting queries routinely look back further — every out-of-window query triggers a database read, and many small reads are slower than one full load. #### `keep_duration_h` — data retention Sets the age limit (in hours) for the vacuum operation. Records older than `max_timestamp - keep_duration_h` are permanently deleted when vacuum runs. **Set this** to match your actual analysis needs. If your forecast models only look back 7 days, keeping 14 days (`336`) gives a comfortable safety margin without accumulating indefinitely. **Leave as `None`** only if you have a strong archival requirement and understand that the database will grow without bound. Even with compaction reducing resolution, old data is not deleted unless vacuum runs with a retention limit. **Do not** set `keep_duration_h` shorter than the oldest data your forecast or reporting queries ever request — vacuum is permanent and irreversible. #### `autosave_interval_sec` — write durability Controls how often dirty (modified) records are flushed to disk automatically, in seconds. **Set to a low value** (e.g. `10`–`30`) on a system that could lose power unexpectedly, such as a Raspberry Pi without a UPS. A power cut between autosaves loses that window of data. **Set to a higher value** (e.g. `300`) on stable systems to reduce write amplification. Each autosave is a full flush of all dirty records, so frequent saves on large dirty sets are more expensive. **Leave as `None`** only if you call `db_save_records()` manually at appropriate points in your application code. With `None`, data written since the last manual save is lost on crash. #### `compaction_interval_sec` — automatic tiered downsampling Controls how often the compaction maintenance job runs, in seconds. The default is 604 800 (one week). Set to `None` to disable automatic compaction entirely. Compaction applies a tiered downsampling policy to old records: - Records older than **2 hours** are downsampled to **15-minute** resolution - Records older than **14 days** are downsampled to **1-hour** resolution This reduces storage and speeds up range queries on historical data while preserving full resolution for recent data where it matters most. Each tier is processed incrementally — only the window since the last compaction run is examined, so weekly runs are fast regardless of total history length. **Leave at the default weekly interval** for most deployments. Compaction is idempotent and cheap when run frequently on small new windows. **Set to a shorter interval** (e.g. `86400`, daily) if your device records at very high frequency (sub-minute) and disk space is a concern. **Set to `None`** only if you have a custom retention policy and manage downsampling manually, or if you store data that must not be averaged (e.g. raw event logs where mean resampling would be meaningless). **Do not** set the interval shorter than `autosave_interval_sec` — compaction reads from the backend and a record that has not been saved yet will not be visible to it. **Interaction with vacuum:** compaction and vacuum are complementary. Compaction reduces resolution of old data; vacuum deletes it entirely past `keep_duration_h`. The recommended pipeline is: compaction runs first (weekly), then vacuum runs immediately after. This means vacuum always operates on already-downsampled data, which is faster and produces cleaner storage boundaries. ### Recommended Configurations by Scenario #### Home server, typical (Raspberry Pi 4, SSD) ```python provider = "LMDB" compression_level = 9 initial_load_window_h = 48 keep_duration_h = 720 # 30 days autosave_interval_sec = 30 compaction_interval_sec = 604800 # weekly ``` #### Home server, low storage (Raspberry Pi Zero, SD card) ```python provider = "SQLite" compression_level = 9 initial_load_window_h = 24 keep_duration_h = 168 # 7 days autosave_interval_sec = 60 compaction_interval_sec = 86400 # daily — reclaim space faster ``` #### Development / testing ```python provider = "SQLite" # or None for fully in-memory compression_level = 0 # faster without compression overhead initial_load_window_h = None # always load everything keep_duration_h = None # never vacuum automatically autosave_interval_sec = None # manual saves only compaction_interval_sec = None # disable compaction ``` #### High-frequency recording (sub-minute intervals) ```python provider = "LMDB" compression_level = 9 initial_load_window_h = 24 keep_duration_h = 336 # 14 days autosave_interval_sec = 10 compaction_interval_sec = 86400 # daily — essential at high frequency ``` ## Storage Backends ### LMDB Backend **Characteristics:** - Memory-mapped file database - Native namespace support via DBIs (Database Instances) - High-performance reads with MVCC - Configurable map size (default: 10 GB) **Configuration:** ```python map_size: int = 10 * 1024 * 1024 * 1024 # 10 GB writemap=True, map_async=True # Performance optimizations max_dbs=128 # Maximum namespaces ``` **File Structure:** ```text data_folder_path/ └── db/ └── lmdbdatabase/ ├── data.mdb └── lock.mdb ``` ### SQLite Backend **Characteristics:** - Single-file relational database - Namespace emulation via `namespace` column - ACID transactions with autocommit mode - Cross-platform compatibility **Schema:** ```sql CREATE TABLE records ( namespace TEXT NOT NULL DEFAULT '', key BLOB NOT NULL, value BLOB NOT NULL, PRIMARY KEY (namespace, key) ); CREATE TABLE metadata ( namespace TEXT PRIMARY KEY, value BLOB ); ``` **File Structure:** ```text data_folder_path/ └── db/ └── sqlitedatabase/ └── data.db ``` ## Timestamp System ### DatabaseTimestamp All records are indexed by UTC timestamps in sortable ISO 8601 format: ```python DatabaseTimestamp.from_datetime(dt: DateTime) -> "20241027T123456[Z]" ``` **Properties:** - Always stored in UTC (timezone-aware required) - Lexicographically sortable - Bijective conversion to/from `pendulum.DateTime` - Second-level precision ### Unbounded Sentinels ```python UNBOUND_START # Smaller than any timestamp UNBOUND_END # Greater than any timestamp ``` Used for open-ended range queries without special-casing `None`. ## Lazy Loading Strategy ### Three-Phase Loading The system uses a progressive loading model to minimize memory footprint: #### **Phase 0: NONE** - No records loaded - First query triggers either: - Initial window load (if `initial_load_window_h` configured) - Full database load (if `initial_load_window_h = None`) - Targeted range load (if explicit range requested) #### **Phase 1: INITIAL** - Partial time window loaded - `_db_loaded_range` tracks coverage: `[start_timestamp, end_timestamp)` - Out-of-window queries trigger incremental expansion: - Left expansion: load records before current window - Right expansion: load records after current window - Unbounded queries escalate to FULL #### **Phase 2: FULL** - All database records in memory - No further database access needed - `_db_loaded_range` spans entire dataset ### Boundary Extension When loading a range `[start, end)`, the system automatically extends boundaries to include: - **First record before** `start` (for interpolation/context) - **First record at or after** `end` (for closing boundary) This prevents additional database lookups during nearest-neighbor searches. ## Namespace Support Namespaces provide logical isolation within a single database instance: ```python # LMDB: uses native DBIs db.save_records(records, namespace="measurement") # SQLite: uses namespace column SELECT * FROM records WHERE namespace='measurement' ``` **Default Namespace:** - Can be set during `open(namespace="default")` - Operations with `namespace=None` use the default - Each record class typically defines its own namespace via `db_namespace()` ## Record Lifecycle ### Insertion ```python db_insert_record(record, mark_dirty=True) ``` 1. Normalize `record.date_time` to UTC `DatabaseTimestamp` 2. Ensure timestamp range is loaded (lazy load if needed) 3. Check for duplicates (raises `ValueError`) 4. Insert into sorted position in memory 5. Update index: `_db_record_index[timestamp] = record` 6. Mark dirty if `mark_dirty=True` ### Retrieval ```python db_get_record(target_timestamp, time_window=None) ``` **Search Strategies:** | `time_window` | Behavior | |---|---| | `None` | Exact match only | | `UNBOUND_WINDOW` | Nearest record (unlimited search) | | `Duration` | Nearest within symmetric window | **Memory-First:** Checks in-memory index before querying database. ### Deletion ```python db_delete_records(start_timestamp, end_timestamp) ``` 1. Ensure range is fully loaded 2. Remove from memory: `records`, `_db_sorted_timestamps`, `_db_record_index` 3. Add to `_db_deleted_timestamps` (tombstone) 4. Discard from dirty sets (cancel pending writes) 5. Physical deletion deferred until `db_save_records()` ## Dirty Tracking The system maintains three dirty sets to optimize writes: ```python _db_dirty_timestamps: set[DatabaseTimestamp] # Modified records _db_new_timestamps: set[DatabaseTimestamp] # Newly inserted _db_deleted_timestamps: set[DatabaseTimestamp] # Pending deletes ``` **Write Strategy:** 1. **Saves first:** Insert/update all dirty records 2. **Deletes last:** Remove tombstoned records 3. **Clear tracking sets:** Reset dirty state **Autosave:** Triggered periodically if `autosave_interval_sec` configured. ## Compression Optional gzip compression reduces storage footprint: ```python # Serialize data = pickle.dumps(record.model_dump()) if compression_level > 0: data = gzip.compress(data, compresslevel=compression_level) # Deserialize (auto-detect) if data[:2] == b'\x1f\x8b': # gzip magic bytes data = gzip.decompress(data) record_data = pickle.loads(data) ``` **Compression is transparent:** Application code never handles compressed data directly. ## Metadata Each namespace can store arbitrary metadata (version, creation time, provider): ```python _db_metadata = { "version": 1, "created": "2024-01-01T00:00:00Z", "provider_id": "LMDB", "compression": True, "backend": "LMDBDatabase" } ``` Stored separately from records using reserved key `__metadata__`. ## Compaction Compaction reduces storage by downsampling old records to a lower time resolution. Unlike vacuum — which deletes records outright — compaction preserves the full time span of the data while replacing many fine-grained records with fewer coarse-grained averages. ### Tiered Downsampling Policy The default policy has two tiers, applied coarsest-first: | Age threshold | Target resolution | Effect | |---|---|---| | Older than 14 days | 1 hour | 15-min records → 1 per hour (75 % reduction) | | Older than 2 hours | 15 minutes | 1-min records → 1 per 15 min (93 % reduction) | Records within the most recent 2 hours are never touched. ### How Compaction Works Each tier is processed incrementally using a stored cutoff timestamp per tier. On each run, only the window `[last_cutoff, new_cutoff)` is examined — records already compacted in a previous run are never re-processed. This makes weekly runs fast even on years of history. For each writable numeric field, records in the window are mean-resampled at the target interval using time interpolation. The original records are deleted and the downsampled records are written back. A **sparse-data guard** skips any window where the existing record count is already at or below the resampled bucket count, preventing compaction from accidentally *increasing* record count for data that is already coarse or irregular. ### Customising the Policy per Namespace Individual data providers can override `db_compact_tiers()` to use a different policy: ```python class PriceDataProvider(DataProvider): def db_compact_tiers(self): # Price data is already at 15-min resolution from the source. # Skip the first tier; only compact to hourly after 2 weeks. return [(to_duration("14 days"), to_duration("1 hour"))] ``` Return an empty list to disable compaction for a specific namespace entirely: ```python class EventLogProvider(DataProvider): def db_compact_tiers(self): return [] # Raw events must not be averaged ``` ### Manual Invocation ```python # Compact all providers in the container data_container.db_compact() # Compact a single provider provider.db_compact() # Use a one-off policy without changing the instance default provider.db_compact(compact_tiers=[ (to_duration("7 days"), to_duration("1 hour")) ]) ``` ### Interaction with Vacuum Compaction and vacuum are complementary and should always run in this order: ```text compact → vacuum ``` Compact first so that vacuum operates on already-downsampled records. This produces cleaner retention boundaries and ensures the vacuum cutoff falls on hour-aligned timestamps rather than arbitrary sub-minute ones. Running them in reverse order (vacuum then compact) wastes work: vacuum may delete records that compaction would have downsampled and kept. The `RetentionManager` registers both jobs and ensures compaction always runs before vacuum within the same maintenance window. ## Vacuum Operation Remove old records to reclaim space: ```python db_vacuum(keep_hours=48) # Keep last 48 hours db_vacuum(keep_timestamp=cutoff) # Keep from cutoff onward ``` **Strategy:** - Computes cutoff relative to `max_timestamp - keep_hours` - Deletes all records before cutoff - Immediately persists changes via `db_save_records()` ## Thread Safety - **LMDB:** Internal lock protects write transactions; reads are lock-free via MVCC - **SQLite:** Lock guards all operations (autocommit mode eliminates transaction deadlocks) - **Record Protocol:** No internal locking (assumes single-threaded access per instance) ## Performance Characteristics | Operation | LMDB | SQLite | |---|---|---| | Sequential read | Excellent (mmap) | Good (indexed) | | Random read | Excellent (mmap) | Good (B-tree) | | Bulk write | Excellent (single txn) | Good (batch insert) | | Range query | Excellent (cursor) | Good (indexed scan) | | Disk usage | Moderate (pre-allocated) | Compact (auto-grow) | | Concurrency | High (MVCC readers) | Low (write serialization) | **Recommendation:** Use LMDB for high-frequency time-series workloads; SQLite for portability and simpler deployment. ## Example Usage ```python # Configuration config.database.provider = "LMDB" config.database.compression_level = 9 config.database.initial_load_window_h = 24 # Load last 24h initially config.database.keep_duration_h = 720 # Retain 30 days config.database.compaction_interval_sec = 604800 # Compact weekly # Access (automatic singleton initialization) class MeasurementData(DatabaseRecordProtocolMixin): records: list[MeasurementRecord] = [] def db_namespace(self) -> str: return "measurement" # Operations measurement = MeasurementData() # Lazy load on first access record = measurement.db_get_record( DatabaseTimestamp.from_datetime(now), time_window=Duration(hours=1) ) # Insert new record measurement.db_insert_record(new_record) # Automatic save (if autosave configured) or manual measurement.db_save_records() # Maintenance pipeline (normally handled by RetentionManager) measurement.db_compact() # downsample old records first measurement.db_vacuum(keep_hours=720) # then delete beyond retention ```